CDS

Accession Number TCMCG027C23068
gbkey CDS
Protein Id XP_018859238.1
Location join(20865305..20867360,20867784..20868600,20869424..20869714,20869917..20870127)
Gene LOC109021135
GeneID 109021135
Organism Juglans regia

Protein

Length 1124aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA350852
db_source XM_019003693.2
Definition phytochrome A1 [Juglans regia]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCTTCAAGGCCCAGCCACTCATCCAGCAACTCGGGGCACTCAAGACACAGCGCTAGGATTATTGCTCAGACCACTGTTGATGCAAAGCTCCATGCAGATTTTGAGGTTTCAGGTGATTCCTTTGATTACTCAAGCTCTGTGCGGGTTACCAGTTCAGTTAGTGGAGATCAACAACCCAGGTCCAGCAAAGTAACCACAGCTTACCTCCATCACATACAGAAAGGCAAGCTGATCCAACCATTTGGTTGCTTGCTGGCCTTAGATGAGAAAACTTTCAAGGTCATTGCATACAGTGAGAATGCCCCTGATATGCTGACCATGGTCAGTCATGCAGTCCCAAGCGTCGGGGAGCACCCAGTTCTTGGCATTGGGACTGATGTAAGAACTATCTTCACTGCCCCTAGTGCCTCTGCATTGCAAAAGGCCCTAGGATTTTGGGAGGTTTCTCTCTTGAACCCCATCTTAGTCCATTGCAAGACATCTGGGAAGCCCTTTTATGCAATTGTGCATCGGGTGACAGGTAGTTTGATCATTGATTTTGAGCCAGTGAAGCCTTACGAAGTCCCCATGACTGCTGCAGGAGCCCTGCAATCATACAAGCTTGCAGCCAAAGCAATTAGCCGATTGCAGTCCTTGCCAAGTGGCAGAATGGAAAGGGTTTGTGATACAATGGTTCAAGAGGTTTTTGAGCTCACTGGTTATGATAGGGTGATGGCATATAAATTTCATGATGATGATCATGGGGAAGTGGTCTCTGAGATCACAAAACCTGGCCTAGAGCCATATCTGGGTTTGCATTATCCAGCCACTGATATACCTCAGGCTGCACGCTTCTTGTTTATGAAGAATAAGATTCGTATGATTGTTGATTGTCATGCAGGACATGTGAAGGTGCTTCAAGATGAGAAGCTTCCATTTGATCTGACGTTGTGTGGTTCAACCTTAAGGGCACCACACAGTTGCCATTCACAGTACATGGAGAACATGAATTCCATTGCTTCTCTAGTTATGGCAGTTGTGGTTAATGATGCAGAAGAAGAGGGAGACAGCTCTAACACTGTGCAGCCACAAAAGAGAAAAAGACTCTGGGGTTTGGTTGTATGCCATAACACAACTCCTAGGTTTGTTCCATTCCCTCTTAGGTATGCCTGTGAGTTTCTCGCTCAAGTATTTGCCATCCATGTGAATAAGGAATTGGAGTTAGAAAACCAAATTGTTGAGAAGAACATCTTGCGTACCCAAACGCTCTTGTGTGATTTGTTGATGCGAGATGCGCCATTGGGAATTGTTTCCCAGAGCCCAAATATAATGGATCTTGTGAAGTGTGATGGGGCTGCTTTATTATACAAGAGCAAGATATGGAGATTGGGAGTAACTCCAAGTGATTTCCACCTGCATGACATATCCTCATGGCTTTCGGAGTGCCATATGGATTCAACAGGTTTGAGTACAGATAGCTTGTATGACGCTGGATTCCCTGGGGCTCTTGCTCTTGAGGATGTAGTATGTGGAATGGCAGCTGTGAGGATAACTTCCAATGACATGATTTTCTGGTTTCGCTCCCCTACTGCTGCAGAAATTCGATGGGGTGGTGCAAAGCATGAACTTGGAGAGAAAGATGATGGTACAAGGATGCACCCAAGATCATCATTCAAGGCTTTCCTTGAAGTCGTGAAGACAAGGAGTGTACCCTGGAAGGATTATGAAATGGATGCAATCCATTCTTTGCAGATTATCCTGAGGAATGCATTCAAAGATATTGAAATAAAGGATACAGGCACCAATGCAATCCATGCAAAGCTCAGTGACCTCAAAATTGAAGGGATGCAAGAACTGGAAGCAGTGACAAGTGAGATGGTCCGTTTAATTGAAACAGCCAGAGTGCCAATTCTGGCTGTCGATGTTGATGGGCTCATTAATGGATGGAATACAAAGATTGCAGAGTTAACAGGTCTTTCTGTTGATAAAGCAATTGGAATGCATTTGCTCACACTCGTGGAAGATTCTTCAAATGATACAGTTGAAAGGATGTTGTCCTTGGCACTGCAGGGCAAAGAAGAGCAGAACATTCAATTTGAGATCAAAACGCATGGTTCCAAGAGTGATTCTGATCCCATCAGCTTAGTTGTGAATGCTTGTGCAAGTAGGGATCTTCGAGATAATGTTGTGGGGGTTTGTTTTGTGGCCCATGATATCACTGGTCAGAAGATAGTAATGGACAAGTTCACTCGGATTGAAGGTGATTACAAAGCTATCGTACAAAACCCAAGTCCTTTGATTCCCCCAATATTTGGTTCAGATGAATTTGGCTGGTGTTCTGAATGGAATCCAGCAATGACAAAGTTGAGTGGGTGGACACGAGAGGACGTCATAGATAAAATGCTTTTGGGGGAGGTTTTTGGGACACAAATGGCATGCTGCCGTCTCAAGAATCAAGAAGCTTTTGTCAATCTTGGAGTGGTACTTAATAATGCAATGACCGGTCAGGAATCTGAAAAAGTCTCTTTTGGTTTCTTTGCTCACAGTGGAAAGTATGTAGAATGCCTGCTATGTGTGAGTAAGAAATTGGACAGAGAGGGTGCTGTCACTGGGGTCTTTTGCTTCTTGCAGCTTGCTAGCCAAGAGCTGCAACGAACACTTCATGTCCAACGTTTATCAGAGCAAACTGCCTTGAAGAGATTGAAAGCATTGGCTTATATAAAAAGGCAGATACGAAATCCGCTTTCTGGGATTATATTTTCTCAGAAAATGATGGAGGGTACCGAGTTAGGAGTTGAACAAAGACAGCTTCTGCATACTACTGCCCAGTGCCAGCGCCAGCTCAGCAAGATTCTTGACGACTCAGATCTTGATAGCATCATTGATGGATACTTGGATCTTGAAATGGTTGAGTTTAGGCTGGATGAAGTTCTGATTGCCTCTATAAGTCAAGCCTTGTCAGAGAGCAACGCAAAGGGAATCCGATTGGTCAATGATGTGGCAGAGGAGATTGTGAATGAAACCCTCTATGGTGACTGTCTTAGGCTTCAACAGGTTTTAGCTGATTTCTTGCTGATATCAGTCAATTATATGACAACTGGAGGTCAGCTTATCGTTACAGGCAGTTTGACCAAAGATCAGTTAGGGCAATCCGTTCATCTTGCCCATCTTGAGCTCAGGATAACACATCCAGGTGGAGGGGTACCAGAAGAATTGCTGAACCAGATGTTTGGAAGTGATGGAGATGCATCTGAGGAGGGAATGAGCCTGTTCATTAGCAGAAAGCTATTAAAGCTCATGAATGGAGATGTACGGTATATGAGGGAAGCAGGCAAATCAACCTTCATCATATCCGTTGAACTTGCTGTAGCACATAAGTTGAAGACCTAA
Protein:  
MSSSRPSHSSSNSGHSRHSARIIAQTTVDAKLHADFEVSGDSFDYSSSVRVTSSVSGDQQPRSSKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPDMLTMVSHAVPSVGEHPVLGIGTDVRTIFTAPSASALQKALGFWEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAISRLQSLPSGRMERVCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKIRMIVDCHAGHVKVLQDEKLPFDLTLCGSTLRAPHSCHSQYMENMNSIASLVMAVVVNDAEEEGDSSNTVQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDLLMRDAPLGIVSQSPNIMDLVKCDGAALLYKSKIWRLGVTPSDFHLHDISSWLSECHMDSTGLSTDSLYDAGFPGALALEDVVCGMAAVRITSNDMIFWFRSPTAAEIRWGGAKHELGEKDDGTRMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQIILRNAFKDIEIKDTGTNAIHAKLSDLKIEGMQELEAVTSEMVRLIETARVPILAVDVDGLINGWNTKIAELTGLSVDKAIGMHLLTLVEDSSNDTVERMLSLALQGKEEQNIQFEIKTHGSKSDSDPISLVVNACASRDLRDNVVGVCFVAHDITGQKIVMDKFTRIEGDYKAIVQNPSPLIPPIFGSDEFGWCSEWNPAMTKLSGWTREDVIDKMLLGEVFGTQMACCRLKNQEAFVNLGVVLNNAMTGQESEKVSFGFFAHSGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQRTLHVQRLSEQTALKRLKALAYIKRQIRNPLSGIIFSQKMMEGTELGVEQRQLLHTTAQCQRQLSKILDDSDLDSIIDGYLDLEMVEFRLDEVLIASISQALSESNAKGIRLVNDVAEEIVNETLYGDCLRLQQVLADFLLISVNYMTTGGQLIVTGSLTKDQLGQSVHLAHLELRITHPGGGVPEELLNQMFGSDGDASEEGMSLFISRKLLKLMNGDVRYMREAGKSTFIISVELAVAHKLKT